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Maximum parsimony
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21	A Comparison of Phylogenetic Reconstruction Methods on an IE Dataset Luay Nakhleh Tandy Warnow Dept. of Computer Science Add to Reading List Source URL: www.cs.utexas.edu Language: English - Date: 2006-09-05 17:00:19 Phylogenetics Computational phylogenetics Maximum parsimony Quantitative comparative linguistics Cladistics Graeco-Armenian Phylogenetic tree UPGMA Perfect phylogeny Neighbor joining Lexical Distance matrices in phylogeny
22	MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods Koichiro Tamura,1,2 Daniel Peterson,2 Nicholas Peterson,2 Glen Stecher,2 Masatoshi Nei,3 and Add to Reading List Source URL: www.megasoftware.net Language: English - Date: 2016-01-11 15:52:39 Computational phylogenetics Phylogenetics Bioinformatics Sequence alignment Masatoshi Nei Multiple sequence alignment Substitution model Maximum parsimony Molecular clock Nucleic acid sequence Lineage Phylogenetic tree
23	1 Large-scale multiple sequence alignment and phylogeny estimation Tandy Warnow1,∗ 1 Department of Computer Science, University of Texas at Austin, Austin, Add to Reading List Source URL: tandy.cs.illinois.edu Language: English - Date: 2014-08-30 16:01:16 Computational phylogenetics Bioinformatics Phylogenetics Multiple sequence alignment Sequence alignment Protein methods Phylogenetic tree Structural alignment Maximum parsimony Homology Protein superfamily Clustal
24	Comparative Cladistics: Fossils, Morphological Data Partitions and Lost Branches in the Fossil Tree of Life Ross Callum Parker Mounce http://orcid.org2046 Add to Reading List Source URL: opus.bath.ac.uk Language: English - Date: 2015-03-19 06:31:20 Phylogenetics Computational phylogenetics Cladogram Maximum parsimony Phylogenetic tree Cladistics PHYLIP Postcrania
25	Evolution, 54(2), 2000, pp. 397–405 INDEPENDENT CONTRASTS SUCCEED WHERE ANCESTOR RECONSTRUCTION FAILS IN A KNOWN BACTERIOPHAGE PHYLOGENY TODD H. OAKLEY1 Add to Reading List Source URL: www.biology.ucr.edu Language: English - Date: 2004-05-14 16:15:44 Phylogenetics Biology Computational phylogenetics Maximum parsimony Long branch attraction Phylogenetic tree Cladistics Outgroup PHYLIP Character evolution Substitution model Evolution
26	The Troubled Growth of Statistical Phylogenetics Add to Reading List Source URL: sysbio.oxfordjournals.org Language: English Biology Phylogenetics Biological classification Computational phylogenetics Evolutionary biology Philosophy of biology Systematics PHYLIP Maximum parsimony Phenetics Cladistics Phylogenetic tree
27	MDL Method: an Inductive Inference Method for Reconstructing Phylogenetic Trees Fengrong Ren Add to Reading List Source URL: www.jsbi.org Language: English - Date: 1998-01-09 02:50:12 Computational phylogenetics Phylogenetics Algorithmic information theory Minimum description length Statistical theory Phylogenetic tree Maximum parsimony PHYLIP MDL Maximum likelihood estimation
28	Syst. Biol. 46(l):101-lllAN ALTERNATING LEAST SQUARES APPROACH TO INFERRING PHYLOGENIES FROM PAIRWISE DISTANCES JOSEPH FELSENSTEIN Department of Genetics, University of Washington, Box, Seattle, Washington Add to Reading List Source URL: sysbio.oxfordjournals.org Language: English Computational phylogenetics Bioinformatics Phylogenetics Biology Statistics Mathematical optimization Least squares Regression analysis Neighbor joining PHYLIP Topology Maximum parsimony
29	Construction of Phylogenetic Trees from Amino Acid Sequences using a Genetic Algorithm Hideo Matsuda Add to Reading List Source URL: www.jsbi.org Language: English - Date: 1998-01-09 02:50:08 Computational phylogenetics Phylogenetics Biology Bioinformatics Multiple sequence alignment Neighbor joining PHYLIP Maximum parsimony Sequence alignment Phylogenetic tree Substitution matrix UPGMA
30	Young Systematist’s Forum of The Systematics Association 1 of 12 http://www.systass.org/ysf/youngsyst03.html Add to Reading List Source URL: systass.org Language: English - Date: 2013-02-18 16:25:41 Philosophy of biology Molecular phylogenetics Cladistics Phylogenetic tree Systematics Maximum parsimony Clade Phylogenetics Science Biology